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  1. 1.   Integrating the intrinsic conformational preferences of noncoded alpha-amino acids modified at the peptide bond into the Noncoded Amino acids Database
  2. Revilla-Lopez, G.; Rodriguez-Ropero, F.; Curco, D.; Torras, J.; Calaza, M. I.; Zanuy, D.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Aleman, C.
  3. Proteins-Structure Function and Bioinformatics. 2011, Jun; 79(6): 1841-1852.
  1. 2.   beta-Barrel Topology of Alzheimer's beta-Amyloid Ion Channels
  2. Jang, H.; Arce, F. T.; Ramachandran, S.; Capone, R.; Lal, R.; Nussinov, R.
  3. Journal of Molecular Biology. 2010, Dec; 404(5): 917-934.
  1. 3.   The G-protein-coupled formylpeptide receptor FPR confers a more invasive phenotype on human glioblastoma cells
  2. Huang, J.; Chen, K.; Chen, J.; Gong, W.; Dunlop, N. M.; Howard, O. M. Z.; Gao, Y.; Bian, X. W.; Wang, J. M.
  3. British Journal of Cancer. 2010, Mar 16; 102(6): 1052-1060.
  1. 4.   Intrinsic conformational preferences of C-alpha,C-alpha-dibenzylglycine
  2. Casanovas, J.; Nussinov, R.; Aleman, C.
  3. Journal of Organic Chemistry. 2008 73(11): 4205-4211.
  1. 5.   Testing beta-helix terminal coils stability by targeted substitutions with non-proteogenic amino acids: A molecular dynamics study
  2. Zanuy, D.; Rodriguez-Ropero, F.; Nussinov, R.; Aleman, C.
  3. Journal of Structural Biology. 2007, Nov; 160(2): 177-189.
  1. 6.   Principles of nanostructure design with protein building blocks
  2. Tsai, C. J.; Zheng, J.; Zanuy, D.; Haspel, N.; Wolfson, H.; Aleman, C.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2007, Jul; 68(1): 1-12.
  1. 7.   Intrinsic conformational characteristics of alpha,alpha-diphenylglycine
  2. Casanovas, J.; Zanuy, D.; Nussinov, R.; Aleman, C.
  3. Journal of Organic Chemistry. 2007, Mar; 72(6): 2174-2181.
  1. 8.   Characterization of the B cell epitopes associated with a truncated form of Pseudomonas exotoxin (PE38) used to make immunotoxins for the treatment of cancer patients
  2. Onda, M.; Nagata, S.; FitzGerald, D. J.; Beers, R.; Fisher, R. J.; Vincent, J. J.; Lee, B.; Nakamura, M.; Hwang, J. L.; Kreitman, R. J.; Hassan, R.; Pastan, I.
  3. Journal of Immunology. 2006, Dec; 177(12): 8822-8834.
  1. 9.   Structure-based design of potent Grb2-SH2 domain antagonists not relying on phosphotyrosine mimics
  2. Jiang, S.; Li, P.; Peach, M. L.; Bindu, L.; Worthy, K. W.; Fisher, R. J.; Burke, T. R.; Nicklaus, M.; Roller, P. P.
  3. Biochemical and Biophysical Research Communications. 2006, Oct; 349(2): 497-503.
  1. 10.   Identification of the intrinsic conformational properties of 1-aminocyclobutane-1-carboxylic acid
  2. Casanovas, J.; Zanuy, D.; Nussinov, R.; Aleman, C.
  3. Chemical Physics Letters. 2006, Oct; 429(4-6): 558-562.
  1. 11.   Role of formyl peptide receptor-like 1 (FPRL1/FPR2) in mononuclear phagocyte responses in Alzheimer disease
  2. Iribarren, P.; Zhou, Y.; Hu, J. Y.; Le, Y. Y.; Wang, J. M.
  3. Immunologic Research. 2005 31(3): 165-176.
  1. 12.   Chirality determination of unusual amino acids using precolumn derivatization and liquid chromatography-electrospray ionization mass spectrometry
  2. Hess, S.; Gustafson, K. R.; Milanowski, D. J.; Alvira, E.; Lipton, M. A.; Pannell, L. K.
  3. Journal of Chromatography A. 2004 1035(2): 211-219.
  1. 13.   Peptide sequence and amyloid formation: Molecular simulations and experimental study of a human islet amyloid polypeptide fragment and its analogs
  2. Zanuy, D.; Porat, Y.; Gazit, E.; Nussinov, R.
  3. Structure. 2004 12(3): 439-455.
  1. 14.   Identification and characterization of peptides that bind to cyanovirin-N, a potent human immunodeficiency virus-inactivating protein
  2. Han, Z. Z.; Simpson, J. T.; Fivash, M. J.; Fisher, R.; Mori, T.
  3. Peptides. 2004 25(4): 551-561.
  1. 15.   Dissection of binding interactions in the complex between the anti-lysozyme antibody HyHEL-63 and its antigen
  2. Li, Y. L.; Urrutia, M.; Smith-Gill, S. J.; Mariuzza, R. A.
  3. Biochemistry. 2003 42(1): 11-22.
  1. 16.   Regulatory effects of deoxycholic acid, a component of the anti-inflammatory traditional Chinese medicine Niuhuang, on human leukocyte response to chemoattractants
  2. Chen, X.; Mellon, R. D.; Yang, L.; Dong, H. F.; Oppenheim, J. J.; Howard, O. M. Z.
  3. Biochemical Pharmacology. 2002 63(3): 533-541.
  1. 17.   A QM/MM approach with effective fragment potentials applied to the dipeptide-water structures
  2. Nemukhin, A. V.; Grigorenko, B. L.; Bochenkova, A. V.; Topol, I. A.; Burt, S. K.
  3. Journal of Molecular Structure-theochem. 2002 581: 167-175.
  1. 18.   Receptors for chemotactic formyl peptides as pharmacological targets
  2. Le, Y. Y.; Yang, Y. M.; Cui, Y. H.; Yazawa, H.; Gong, W. H.; Qiu, C. P.; Wang, J. M.
  3. International Immunopharmacology. 2002 2(1): 1-13.
  1. 19.   Potential role of the formyl peptide receptor-like 1 (FPRL1) in inflammatory aspects of Alzheimer's disease
  2. Cui, Y. H.; Le, Y. Y.; Yazawa, H.; Gong, W. H.; Wang, J. M.
  3. Journal of Leukocyte Biology. 2002 72(4): 628-635.
  1. 20.   Pleiotropic roles of formyl peptide receptors
  2. Le, Y. Y.; Oppenheim, J. J.; Wang, J. M.
  3. Cytokine & Growth Factor Reviews. 2001 12(1): 91-105.
  1. 21.   alpha- and 3(10)-helix interconversion: A quantum-chemical study on polyalanine systems in the gas phase and in aqueous solvent
  2. Topol, I. A.; Burt, S. K.; Deretey, E.; Tang, T. H.; Perczel, A.; Rashin, A.; Csizmadia, I. G.
  3. Journal of the American Chemical Society. 2001 123(25): 6054-6060.
  1. 22.   Peptide mapping by capillary zone electrophoresis: How close is theoretical simulation to experimental determination
  2. Janini, G. M.; Metral, C. J.; Issaq, H. J.
  3. Journal of Chromatography A. 2001 924(1-2): 291-306.
  1. 23.   Functional preference of the constituent amino acid residues in a phage-library-based nonphosphorylated inhibitor of the Grb2- SH2 domain
  2. Lung, F. D. T.; Lang, Y. Q.; King, C. R.; Varady, J.; Wu, X. W.; Wang, S.; Roller, P. P.
  3. Journal of Peptide Research. 2001 57(6): 447-454.
  1. 24.   Differential regulation of responsiveness to fMLP and C5a upon dendritic cell maturation: correlation with receptor expression
  2. Yang, D.; Chen, Q.; Stoll, S.; Chen, X.; Howard, O. M.; Oppenheim, J. J.
  3. Journal of Immunology. 2000 165(5): 2694-702.
  1. 25.   The synthetic peptide Trp-Lys-Tyr-Met-Val-D-Met is a potent chemotactic agonist for mouse formyl peptide receptor
  2. He, R.; Tan, L.; Browning, D. D.; Wang, J. M.; Ye, R. D.
  3. Journal of Immunology. 2000 165(8): 4598-4605.
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