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  1. 1.   High-Affinity Interactions of the nSH3/cSH3 Domains of Grb2 with the C-Terminal Proline-Rich Domain of SOS1
  2. Liao,Tsung-Jen; Jang,Hyunbum; Nussinov,Ruth; Fushman, David
  3. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. 2020, Feb 19; 142: 3401-3411.
  1. 2.   Allostery in Its Many Disguises: From Theory to Applications
  2. Wodak, Shoshana J.; Paci, Emanuele; Dokholyan, Nikolay; Berezovsky, Igor N.; Horovitz, Amnon; Li, Jing; Hilser, Vincent J.; Behar, Ivet; Karanicolas, John; Stock, Gerhard; Hamm, Peter; Stote, Roland H.; Eberhardt, Jerome; Chebaro, Yassmine; Dejaegere, Annick; Cecchini, Marco; Changeux, Jean-Pierre; Bolhuis, Peter G.; Vreede, Jocelyne; Faccioli, Pietro; Orioli, Simone; Ravasio, Riccardo; Yen, Le; Brito, Carolina; Wyart, Matthieu; Gkeka, Paraskevi; Rivalta, Ivan; Palermo, Giulia; Mccammon, J. Andrew; Panecka-Hofman, Joanna; Wade, Rebecca C.; Di Pizio, Antonella; Niv, Masha Y.; Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum; Padhorny, Dzmitry; Kozakov, Dima; Mcleish, Tom
  3. Structure (London, England : 1993). 2019, Apr 2; 27(4): 566-578.
  1. 3.   Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex
  2. Calabrese,Dave; Chen,Xiang; Leon, Elena C.; Gaikwad, Snehal M.; Phyo, Zaw; Hewitt, William M.; Alden, Stephanie; Hilimire, Thomas A.; He, Fahu; Michalowski, Aleksandra M.; Simmons, John K.; Saunders, Lindsey B.; Zhang, Shuling; Connors, Daniel; Walters,Kylie; Mock, Beverly A.; Schneekloth,Jay
  3. NATURE COMMUNICATIONS. 2018, Oct 12; 9(1): 4229.
  1. 4.   A dynamic hydrophobic core orchestrates allostery in protein kinases
  2. Kim, Jonggul; Ahuja, Lalima G.; Chao, Frank; Xia, Youlin; McClendon, Christopher L.; Kornev, Alexandr P.; Taylor, Susan S.; Veglia, Gianluigi
  3. SCIENCE ADVANCES. 2017, APR; 3(4):
  1. 5.   Multiple-Targeting and Conformational Selection in the Estrogen Receptor: Computation and Experiment
  2. Yuan, P.; Liang, K. W.; Ma, B. Y.; Zheng, N.; Nussinov, R.; Huang, J.
  3. Chemical Biology & Drug Design. 2011, Jul; 78(1): 137-149.
  1. 6.   Novel Peptides Based on HIV-1 gp120 Sequence with Homology to Chemokines Inhibit HIV Infection in Cell Culture
  2. Chertov, O.; Zhang, N.; Chen, X.; Oppenheim, J. J.; Lubkowski, J.; McGrath, C.; Sowder, R. C.; Crise, B. J.; Malyguine, A.; Kutzler, M. A.; Steele, A. D.; Henderson, E. E.; Rogers, T. J.
  3. Plos One. 2011, Jan 11; 6(1): 10.
  1. 7.   The role of dynamic conformational ensembles in biomolecular recognition
  2. Boehr, D. D.; Nussinov, R.; Wright, P. E.
  3. Nature Chemical Biology. 2009 5(11): 789-796.
  1. 8.   The structure of receptor-associated protein (RAP)
  2. Lee, D.; Walsh, J. D.; Migliorini, M.; Yu, P.; Cai, T.; Schwieters, C. D.; Krueger, S.; Strickl, D. K.; Wang, Y. X.
  3. Protein Science. 2007, Aug; 16(8): 1628-1640.
  1. 9.   Structural dynamics of the cooperative binding of organic molecules in the human cytochrome P450 3A4
  2. Fishelovitch, D.; Hazan, C.; Shaik, S.; Wolfson, H. J.; Nussinov, R.
  3. Journal of the American Chemical Society. 2007, Feb; 129(6): 1602-1611.
  1. 10.   Studies of the biological properties of human beta-defensin 1
  2. Pazgier, M.; Prahl, A.; Hoover, D. M.; Lubkowski, J.
  3. Journal of Biological Chemistry. 2007, Jan; 282(3): 1819-1829.
  1. 11.   Disruption of estrogen receptor DNA-binding domain and related intramolecular communication restores tamoxifen sensitivity in resistant breast cancer
  2. Wang, L. H.; Yang, X. Y.; Zhang, X. H.; An, P.; Kim, H. J.; Huang, J. Q.; Clarke, R.; Osborne, C. K.; Inman, J. K.; Appella, E.; Farrar, W. L.
  3. Cancer Cell. 2006, Dec; 10(6): 487-499.
  1. 12.   Structural basis of interaction between urokinase-type plasminogen activator and its receptor
  2. Barinka, C.; Parry, G.; Callahan, J.; Shaw, D. E.; Kuo, A.; Bdeir, K.; Cines, D. B.; Mazar, A.; Lubkowski, J.
  3. Journal of Molecular Biology. 2006, Oct; 363(2): 482-495.
  1. 13.   RAP uses a histidine switch to regulate its interaction with LRP in the ER and Golgi
  2. Lee, D.; Walsh, J. D.; Mikhailenko, I.; Yu, P.; Migliorini, M.; Wu, Y. B.; Krueger, S.; Curtis, J. E.; Harris, B.; Lockett, S.; Blacklow, S. C.; Strickl, D. K.; Wang, Y. X.
  3. Molecular Cell. 2006, MAY 5; 22(3): 423-430.
  1. 14.   Variants of CCR5, which are permissive for HIV-1 infection, show distinct functional responses to CCL3, CCL4 and CCL5
  2. Dong, H. F.; Wigmore, K.; Carrington, M. N.; Dean, M.; Turpin, J. A.; Howard, O. M. Z.
  3. Genes and Immunity. 2005, OCT; 6(7): 609-619.
  1. 15.   Ligand-induced partitioning of human CXCR1 chemokine receptors with lipid raft microenvironments facilitates G-protein-dependent signaling
  2. Jiao, X. M.; Zhang, N.; Xu, X. H.; Oppenheim, J. J.; Jin, T.
  3. Molecular and Cellular Biology. 2005, JUL; 25(13): 5752-5762.
  1. 16.   ATP-regulated module (ARM) of the atrial natriuretic factor receptor guanylate cyclase
  2. Duda, T.; Venkataraman, V.; Ravichandran, S.; Sharma, R. K.
  3. Peptides. 2005, JUN; 26(6): 969-984.
  1. 17.   Identification of functional domains in the formyl peptide receptor-like 1 for agonist-induced cell chemotaxis
  2. Le, Y. Y.; Ye, R. D.; Gong, W. H.; Li, J. X.; Iribarren, P.; Wang, J. M.
  3. Febs Journal. 2005, FEB; 272(3): 769-778.
  1. 18.   The soluble sema domain of the RON receptor inhibits macrophage-stimulating protein-induced receptor activation
  2. Angeloni, D.; Danilkovitch-Miagkova, A.; Miagkov, A.; Leonard, E. J.; Lerman, M. I.
  3. Journal of Biological Chemistry. 2004 279(5): 3726-3732.
  1. 19.   Inositol 1,4,5-trisphosphate receptor ubiquitination is mediated by mammalian Ubc7, a component of the endoplasmic reticulum-associated degradation pathway, and is inhibited by chelation of intracellular Zn2+
  2. Webster, J. M.; Tiwari, S.; Weissman, A. M.; Wojcikiewicz, R. J. H.
  3. Journal of Biological Chemistry. 2003 278(40): 38238-38246.
  1. 20.   Triggering loops and enzyme function: Identification of loops that trigger and modulate movements
  2. Gunasekaran, K.; Ma, B. Y.; Nussinov, R.
  3. Journal of Molecular Biology. 2003 332(1): 143-159.
  1. 21.   Protein 14-3-3 sigma interacts with and favors cytoplasmic subcellular localization of the glucocorticoid receptor, acting as a negative regulator of the glucocorticoid signaling pathway
  2. Kino, T.; Souvatzoglou, E.; De Martino, M. U.; Tsopanomihalu, M.; Wan, Y. H.; Chrousos, G. P.
  3. Journal of Biological Chemistry. 2003 278(28): 25651-25656.
  1. 22.   Structural basis for oligosaccharide recognition by Pyrococcus furiosus maltodextrin-binding protein
  2. Evdokimov, A. G.; Anderson, D. E.; Routzahn, K. M.; Waugh, D. S.
  3. Journal of Molecular Biology. 2001 305(4): 891-904.
  1. 23.   A targeted dominant negative mutation of the thyroid hormone alpha 1 receptor causes increased mortality, infertility, and dwarfism in mice
  2. Kaneshige, M.; Suzuki, H.; Kaneshige, K.; Cheng, J.; Wimbrow, H.; Barlow, C.; Willingham, M. C.; Cheng, S. Y.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2001 98(26): 15095-15100.
  1. 24.   Crystal structure of the dimeric C-terminal domain of TonB reveals a novel fold
  2. Chang, C. S.; Mooser, A.; Pluckthun, A.; Wlodawer, A.
  3. Journal of Biological Chemistry. 2001 276(29): 27535-27540.
  1. 25.   The cytoplasmic and transmembrane domains of the p75 and Trk a receptors regulate high affinity binding to nerve growth factor
  2. Esposito, D.; Patel, P.; Stephens, R. M.; Perez, P.; Chao, M. V.; Kaplan, D. R.; Hempstead, B. L.
  3. Journal of Biological Chemistry. 2001 276(35): 32687-32695.
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