ABCS Publications
Antigenic re-stimulation of virus-specific memory CD8 T Cells requires days of lytic protein accumulation for maximal cytotoxic capacity
Inborn errors of Type I IFN immunity in patients with life-threatening COVID-19
Cross-resistance of cisplatin selected cells to anti-microtubule agents: Role of general survival mechanisms
Analysis of SARS-CoV-2 ORF3a structure reveals chloride binding sites
HIV-1 viremia not suppressible by antiretroviral therapy can originate from large T cell clones producing infectious virus
A germline 1;3 translocation disrupting the VHL gene: a novel genetic cause for von Hippel-Lindau
Serological responses to human virome define clinical outcomes of Italian patients infected with SARS-CoV-2
Novel, abundant Drosha isoforms are deficient in miRNA processing in cancer cells
Identification of potential modulators of Osteosarcoma metastasis by high throughput cellular screening of natural products
In search of genetic factors predisposing to familial hairy cell leukemia (HCL): exome-sequencing of four multiplex HCL pedigrees
A viral exposure signature defines early onset of hepatocellular carcinoma
Using iCn3D and the World Wide Web for structure-based collaborative research: Analyzing molecular interactions at the root of COVID-19
Optimization for sequencing and analysis of degraded FFPE-RNA samples
Induction of DNMT3B by PGE2 and IL6 at distant metastatic sites promotes epigenetic modification and breast cancer colonization
Impact of losing hRpn13 Pru or UCHL5 on proteasome clearance of ubiquinated proteins and RA190 cytoxicity
Impact of cyanine conformational restraint in the near-infrared range
Author Correction: Safety and feasibility of anti-CD19 CAR T cells with fully human binding domains in patients with B-cell lymphoma
Recent developments in the general atomic and molecular electronic structure system
Repurposing the Pummerer rearrangement: determination of methionine sulfoxides in peptides
Safety and feasibility of anti-CD19 CAR T cells with fully human binding domains in patients with B-cell lymphoma
Intact HIV proviruses persist in children seven to nine years after initiation of antiretroviral therapy in the first year of life
Impact of antiretroviral therapy duration on HIV-1 infection of T Cells within anatomic sites
HIV proviral sequence database: a new public database for near full-length HIV proviral sequences and their meta-analyses
Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors
Single-Cell Profiling Defines Transcriptomic Signatures Specific to Tumor-Reactive versus Virus-Responsive CD4+T Cells
Electrostatically driven Guanidinium interactions domains that control hydrogel-mediated protein delivery in vivo
Contribution of SLC22A12 on hypouricemia and its clinical significance for screening purposes
Linked dual-class HIV resistance mutations are associated with treatment failure
Assessment of Coagulation Homeostasis in Blunt, Penetrating, and Thermal Trauma: Guidance for a Multicenter Systems Biology Approach
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer
The upcoming subatomic resolution revolution
A Thpok-Directed Transcriptional Circuitry Promotes Bcl6 and Maf Expression to Orchestrate T Follicular Helper Differentiation
TLR7 agonist administration to SIV-infected macaques receiving early initiated cART does not induce plasma viremia
Clones of infected cells arise early in HIV-infected individuals
Associations of CDH1 germline variant location and cancer phenotype in families with hereditary diffuse gastric cancer (HDGC)
Robustness of RNA sequencing on older formalin-fixed paraffin-embedded tissue from high-grade ovarian serous adenocarcinomas
Relationship between human leukocyte antigen alleles and risk of Kaposi's sarcoma in Cameroon
The Natural Product Butylcycloheptyl Prodiginine Binds Pre-miR-21, Inhibits Dicer-Mediated Processing of Pre-miR-21, and Blocks Cellular Proliferation
Genome Assembly and Annotation of the Trichoplusia ni Tni-FNL Insect Cell Line Enabled by Long-Read Technologies
The emergence and functional fitness of memory CD4+ T cells require the transcription factor Thpok
A novel pathway of LPS uptake through syndecan-1 leading to pyroptotic cell death
NPHS2 V260E is a frequent cause of steroid-resistant nephrotic syndrome in Black South African children
PanoromiX: a time-course network medicine platform integrating molecular assays and pathophenotypic data
Plasma metabolomic profiling of a ketamine and placebo crossover trial of major depressive disorder and healthy control subjects
Fetal-not maternal APOL1 genotype associated with risk for preeclampsia in those with African ancestry
Defining the conditional basis of silicon phthalocyanine near-IR ligand exchange
Hybrid correlation energy (HyCE): an approach based on separate evaluations of internal and external components
Direct molecular dissection of tumor parenchyma from tumor stroma in tumor xenograft using mass spectrometry–based glycoproteomics
Genetics and Pathogenesis of Diffuse Large B-Cell Lymphoma
Synthesis and biological evaluation of fluorescent bryostatin analogues
Natural polyphenols as sirtuin 6 modulators
Single cell analysis reveals cancer stem cell heterogeneity in hepatocellular carcinoma
Ca2+ -sensor neurocalcin δ and hormone ANF Modulate ANF-RGC activity by diverse pathways: role of the signaling helix domain
The evolutionary landscape of chronic lymphocytic leukemia treated with ibrutinib targeted therapy
The full transcription map of mouse papillomavirus type 1 (MmuPV1) in mouse wart tissues
No evidence of HIV replication in children on antiretroviral therapy
Control of regulatory T cell differentiation by the transcription factors Thpok and LRF
Control of regulatory T cell differentiation by the transcription factors Thpok and LRF
Conformational energy range of ligands in protein crystal structures: the difficult quest for accurate understanding
Transcriptomic profiling and quantitative high-throughput (qHTS) drug screening of CDH1 deficient hereditary diffuse gastric cancer (HDGC) cells identify treatment leads for familial gastric cancer
A mouse recapitulating APOL1-associated kidney disease
In vivo activation of duocarmycin-antibody conjugates by near-infrared light
Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir
Ex vivo activation of CD4+ T-cells from donors on suppressive ART can lead to sustained production of infectious HIV-1 from a subset of infected cells
Membrane Guanylate Cyclase catalytic Subdomain: Structure and Linkage with Calcium Sensors and Bicarbonate
Somatic Genomics and Clinical Features of Lung Adenocarcinoma: A Retrospective Study
Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA
Comparative proteomics of a model MCF10A-KRasG12V cell line reveals a distinct molecular signature of the KRasG12V cell surface
Whole exome sequencing in families with CLL detects a variant in Integrin β 2 associated with disease susceptibility
The NIH Protein Capture Reagents Program (PCRP): a standardized protein affinity reagent toolbox
Identification of extracellular miRNA in archived serum samples by next-generation sequencing from RNA extracted using multiple methods
APOBEC3 proteins can copackage and comutate HIV-1 genomes
Whole exome sequencing in families at high risk for Hodgkin lymphoma: identification of a predisposing mutation in the KDR gene
Retrovirus Integration Database (RID): a public database for retroviral insertion sites into host genomes
The C/EBPδ protein is stabilized by estrogen receptor α activity, inhibits SNAI2 expression and associates with good prognosis in breast cancer
GTF2E2 Mutations Destabilize the General Transcription Factor Complex TFIIE in Individuals with DNA Repair-Proficient Trichothiodystrophy
The transition from the open minimum to the ring minimum on the ground state and on the lowest excited state of like symmetry in ozone: A configuration interaction study
Identification of IL-23p19 as an endothelial proinflammatory peptide that promotes gp130-STAT3 signaling
Infrared Spectroscopy and Structure of (NO)n Clusters
Clonally expanded CD4+ T cells can produce infectious HIV-1 in vivo
Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads
Towards better precision medicine: PacBio single-molecular long reads resold the interpretation of HIV drug resistant mutation profiles at explicit quasispecies (haplotype) level
Common Genetic Variants Found in HLA and KIR Immune Genes in Autism Spectrum Disorder
Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection
Whole-exome sequencing reveals a C-terminal germline variant in CEBPA-associated acute myeloid leukemia: 45-year follow-up of a large family
Elevated plasma viral loads in romidespin treated SIV-infected rhesus macaques on suppressive combination antiretroviral therapy
LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes
Reactive Species Involved in the Regioselective Photooxidation of Heptamethine Cyanines
Histone H3 Lysine 27 demethylases Jmjd3 and Utx are required for T-cell differentiation
The Proto-oncogene Transcription Factor Ets1 Regulates Neural Crest Development through Histone Deacetylase 1 to Mediate Output of Bone Morphogenetic Protein Signaling
A population-structured HIV epidemic in Israel: roles of risk and ethnicity
The Somatic Autosomal Mutation Matrix in Cancer Genomes
AVIA v2.0: annotation, visualization and impact analysis of genomic variants and genes
Longitudinal genetic characterization reveals that cell proliferation maintains a persistent HIV Type 1 DNA pool during effective HIV therapy
Juvenile myelomonocytic leukemia due to a germline CBL Y371C mutation: 35‑year follow‑up of a large family,
APOL1 toxin, innate immunity, and kidney injury
New insights into the enzymatic mechanism of human chitotriosidase (CHIT1) catalytic domain by atomic resolution X-ray diffraction and hybrid QM/MM
Can structural features of kinase receptors provide clues on selectivity and inhibition? A molecular modeling study
ALDsuite: Dense marker MALD using principalcomponents of ancestral linkage disequilibrium
Acute and Chronic Plasma Metabolomic and Liver Transcriptomic Stress Effects in a Mouse Model with Features of Post-Traumatic Stress Disorder
BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells
Specific HIV integration sites are linked to clonal expansion and persistence of infected cells
PAPNC, a novel method to calculate nucleotide diversity from large scale next generation sequencing data
An Example of Genetically Distinct HIV Type 1 Variants in Cerebrospinal Fluid and Plasma During Suppressive Therapy
Rare missense variants in POT1 predispose to familial cutaneous malignant melanoma
Aminolysis of an N-diazeniumdiolated amidine as an approach to diazeniumdiolated ammonia
Covalent bonds are created by the drive of electron waves to lower their kinetic energy through expansion
Mutations in HIV-1 RT affect the errors made in a single cycle of viral replication
Pharmacophore model of the quercetin binding site of the SIRT6 protein
Lack of detectable HIV-1 molecular evolution during suppressive antiretroviral therapy
The identification of a novel SIRT6 modulator from Trigonella foenum-graecum using ligand fishing with protein coated magnetic beads
Enigma prevents Cbl-c-mediated ubiquitination and degradation of RETMEN2A
Identification of gene signatures used to recognize biological characteristics of gastric cancer upon gene expression data
The HIV-1 reservoir in eight patients on long-term suppressive antiretroviral therapy is stable with few genetic changes over time
Homology-mediated end-capping as a primary step of sister chromatid fusion in the breakage-fusion-bridge cycles
Nanoinformatics knowledge infrastructures: bringing efficient information management to nanomedical research
HIV populations are large and accumulate high genetic diversity in a nonlinear fashion
Evaluation of sequence ambiguities of the HIV-1 pol gene as a method to identify recent HIV-1 infection in transmitted drug resistance surveys
Decoding nitric oxide release rates of amine-based diazeniumdiolates
Synthesis and characterization of a SIRT6 open tubular column: predicting deacetylation activity using frontal chromatography
Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA
Knowledge and theme discovery across very large biological data sets using distributed queries: a prototype combining unstructured and structured data
Guanine holes are prominent targets for mutation in cancer and inherited disease
Non-B DB v2.0: a database of predicted non-B DNA-forming motifs and its associated tools
Trypsin-mediated 18O/16O labeling for biomarker discovery
Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule
Nanoinformatics workshop report: Current resources, community needs, and the proposal of a collaborative framework for data sharing and information integration
High-level theoretical study of the NO dimer and tetramer: has the tetramer been observed?
Ultrasensitive allele-specific PCR reveals rare preexisting drug-resistant variants and a large replicating virus population in macaques infected with a simian immunodeficiency virus containing human immunodeficiency virus reverse transcriptase
Bcl11a is essential for lymphoid development and negatively regulates p53
A molecular model of the enantioselective liquid chromatographic separation of (R,S)-ifosfamide and its N-dechloroethylated metabolites on a teicoplanin aglycon chiral stationary phase
Genes affected by mouse mammary tumor virus (MMTV) proviral insertions in mouse mammary tumors are deregulated or mutated in primary human mammary tumors
Efficient targeted gene disruption in Xenopus embryos using engineered transcription activator-like effector nucleases (TALENs)
Hematopoietic precursor cells isolated from patients on long-term suppressive HIV therapy did not contain HIV-1 DNA
Setbp1 promotes the self-renewal of murine myeloid progenitors via activation of Hoxa9 and Hoxa10
Nanoinformatics: developing new computing applications for nanomedicine
Searching for non-B DNA-forming motifs using nBMST (non-B DNA motif search tool)
Proteomic profiling of H-Ras-G12V induced hypertrophic cardiomyopathy in transgenic mice using comparative LC-MS analysis of thin fresh-frozen tissue sections
Study of interaction energies between the PAMAM dendrimer and nonsteroidal anti-inflammatory drug using a distributed computational strategy and experimental analysis by ESI-MS/MS
The role of methylation in the intrinsic dynamics of B- and Z-DNA
Post-digestion ¹⁸O exchange/labeling for quantitative shotgun proteomics of membrane proteins
Multiple sources of contamination in samples from patients reported to have XMRV infection
Nanoinformatics: a new area of research in nanomedicine
Rapid and efficient reprogramming of somatic cells to induced pluripotent stem cells by retinoic acid receptor gamma and liver receptor homolog 1
Supramolecular complexes of quantum dots and a polyamidoamine (PAMAM)-folate derivative for molecular imaging of cancer cells
Single genome sequencing of HIV-1 gag and protease resistance mutations at virologic failure during the OK04 trial of simplified versus standard maintenance therapy
Non-B DB: a database of predicted non-B DNA-forming motifs in mammalian genomes
Nanoinformatics: an emerging area of information technology at the intersection of bioinformatics, computational chemistry and nanobiotechnology
Reprogramming of T cells to natural killer-like cells upon Bcl11b deletion
Optimized method for computing (18)O/(16)O ratios of differentially stable-isotope labeled peptides in the context of postdigestion (18)O exchange/labeling
The zinc-dependent protease activity of the botulinum neurotoxins
Euprosterna elaeasa virus genome sequence and evolution of the Tetraviridae family: emergence of bipartite genomes and conservation of the VPg signal with the dsRNA Birnaviridae family
Temporal characteristics of botulinum neurotoxin therapy